BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014D03LP1|AL426673
(796 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 1522 0.0
>3x_Contig1619
Length = 7770
Score = 1522 bits (766), Expect = 0.0
Identities = 789/797 (98%), Gaps = 2/797 (0%)
Strand = Plus / Plus
Query: 1 agtctgcgagtagatatattattatactataaatttattatcaagaattactcttccctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1651 agtctgcgagtagatatattattatactataaatttattatcaagaattactcttccctg 1710
Query: 61 caaatgtgacatcacccaaccctagggttgggtgangtngcgcaggattataatataaac 120
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 1711 caaatgtgacatcacccaaccctagggttgggtgatgtcgcgcaggattataatataaac 1770
Query: 121 aaaccccgcggctacctccagtattgaaagtagccgcggggaatattattaatatataaa 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1771 aaaccccgcggctacctccagtattgaaagtagccgcggngaatattattaatatataaa 1830
Query: 181 ttatctactagtgattctacaatttctaahaatattaaattagaattatgtaataaatta 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1831 ttatctactagtgattctacaatttctaaaaatattaaattagaattatgtaataaatta 1890
Query: 241 aatgaagaattaaatactaattcttcaaaccatactcccccccgcvcggcatcgccctac 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1891 aatgaagaattaaatactaattcttcaaaccatactcccccccgcgcggcatcgccctac 1950
Query: 301 cgtagg-tagggcgagccgcgcggggaatatgatgatattatttctaaaattaatattga 359
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1951 cgtagggtagggcgagccgcgcggggaatatgatgatattatttctaaaattaatattga 2010
Query: 360 atatattgtaggatttatcgaagctgaaggtcatttagctatttctaaaaatataaacaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2011 atatattgtaggatttatcgaagctgaaggtcatttagctatttctaaaaatataaacaa 2070
Query: 420 taactataaaataagtttagaagtatctcaacatataaattcacccgcggctcctccctt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2071 taactataaaataagtttagaagtatctcaacatataaattcacccgcggctcctccctt 2130
Query: 480 cggggggagaccgcggggaagatttaatgaaggctattcaagatactattttaaattgaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2131 cggggggagaccgcggggaagatttaatgaaggctattcaagatactattttaaattgaa 2190
Query: 540 ctcctgataatagtttattatatgatttacctaaatctactaataaaatttataaacccc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2191 ctcctgataatagtttattatatgatttacctaaatctactaataaaatttataaacccc 2250
Query: 600 gcgcgctcctcccctggtaatccctttaaaggggaggagtccgcggggragatagtaata 659
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2251 gcg-gctcctcccctggtaatccctttaaaggggaggagtccgcggggaagatagtaata 2309
Query: 660 aatatagattttaaatttctagtactgatagattatattatcaagtatttccaactatgt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2310 aatatagattttaaatttctagtactgatagattatattatcaagtatttccaactatgt 2369
Query: 720 taaatagtggattatatactagaaaatatattgattttgtaatgtgattttctagtatta 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2370 taaatagtggattatatactagaaaatatattgattttgtaatgtgattttctagtatta 2429
Query: 780 tcattataaaacatggt 796
|||||||||||||||||
Sbjct: 2430 tcattataaaacatggt 2446
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7103
Number of Sequences: 1807
Number of extensions: 7103
Number of successful extensions: 106
Number of sequences better than 1.0e-20: 1
length of query: 796
length of database: 10,358,551
effective HSP length: 16
effective length of query: 780
effective length of database: 10,329,639
effective search space: 8057118420
effective search space used: 8057118420
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)